Package index • manCTMed

Data Generation Functions

GenData(): Simulate Data

IllustrationGenData(): Simulate Data (Illustration)

RandomMeasurement(): Simulate Random Measurement

Model Fitting Functions

FitDynr(): Fit the Model using the dynr Package

FitMx(): Fit the Model using the OpenMx Package

IllustrationFitDynr(): Fit the Model using the dynr Package (Illustration)

IllustrationFitMx(): Fit the Model using the OpenMx Package (Illustration)

IllustrationMCPhiSigma(): Generate a Sampling Distribution of Drift Matrices and Process Noise Covariance Matrices (Illustration)

IllustrationPrepData(): Prepare Data Before Model Fitting (Illustration)

PhiHat(): Estimated Drift Matrix

ThetaHat(): Estimated Drift Matrix and Process Noise

Confidence Interval Functions

BootPara(): Parametric Bootstrap

BootParaStdXMY(): Parametric Bootstrap Confidence Intervals for X-M-Y (Standardized)

BootParaStdXYM(): Parametric Bootstrap Confidence Intervals for X-Y-M (Standardized)

BootParaStdYMX(): Parametric Bootstrap Confidence Intervals for Y-M-X (Standardized)

BootParaXMY(): Parametric Bootstrap Confidence Intervals for X-M-Y

BootParaXYM(): Parametric Bootstrap Confidence Intervals for X-Y-M

BootParaYMX(): Parametric Bootstrap Confidence Intervals for Y-M-X

DeltaStdXMY(): Delta Method Confidence Intervals for X-M-Y (Standardized)

DeltaStdXYM(): Delta Method Confidence Intervals for X-Y-M (Standardized)

DeltaStdYMX(): Delta Method Confidence Intervals for Y-M-X (Standardized)

DeltaXMY(): Delta Method Confidence Intervals for X-M-Y

DeltaXYM(): Delta Method Confidence Intervals for X-Y-M

DeltaYMX(): Delta Method Confidence Intervals for Y-M-X

IllustrationBootPara(): Parametric Bootstrap (Illustration)

MCStdXMY(): Monte Carlo Method Confidence Intervals for X-M-Y (Standardized)

MCStdXYM(): Monte Carlo Method Confidence Intervals for X-Y-M (Standardized)

MCStdYMX(): Monte Carlo Method Confidence Intervals for Y-M-X (Standardized)

MCXMY(): Monte Carlo Method Confidence Intervals for X-M-Y

MCXYM(): Monte Carlo Method Confidence Intervals for X-Y-M

MCYMX(): Monte Carlo Method Confidence Intervals for Y-M-X

Illustration Functions

IllustrationBootPara(): Parametric Bootstrap (Illustration)

IllustrationFigScatterPlotCoverage(): Illustration Plot Coverage Probabilities

IllustrationFigScatterPlotPower(): Illustration Plot Statistical Power

IllustrationFigScatterPlotSeBias(): Illustration Plot Standard Error Bias

IllustrationFitDynr(): Fit the Model using the dynr Package (Illustration)

IllustrationFitMx(): Fit the Model using the OpenMx Package (Illustration)

IllustrationGenData(): Simulate Data (Illustration)

IllustrationMCPhiSigma(): Generate a Sampling Distribution of Drift Matrices and Process Noise Covariance Matrices (Illustration)

IllustrationPrepData(): Prepare Data Before Model Fitting (Illustration)

SimIllustration(): Simulation Replication (Illustration)

SimIllustrationDynrBootPara(): Simulation Replication - BootPara

SimIllustrationDynrBootParaStdXMY(): Simulation Replication - BootParaStdXMY

SimIllustrationDynrBootParaXMY(): Simulation Replication - BootParaXMY

SimIllustrationDynrDeltaStdXMY(): Simulation Replication - Illustration (DynrDeltaStdXMY)

SimIllustrationDynrDeltaXMY(): Simulation Replication - Illustration (DynrDeltaXMY)

SimIllustrationDynrMCPhiSigma(): Simulation Replication - Illustration (MCPhiSigma)

SimIllustrationDynrMCStdXMY(): Simulation Replication - Illustration (DynrMCStdXMY)

SimIllustrationDynrMCXMY(): Simulation Replication - Illustration (DynrMCXMY)

SimIllustrationFitDynr(): Simulation Replication - IllustrationFitDynr

SimIllustrationFitMx(): Simulation Replication - IllustrationFitMx

SimIllustrationGenData(): Simulation Replication - IllustrationGenData

SimIllustrationPara(): Simulation Replication Parametric Bootstrap (Parallel)

SumIllustration(): Summary (Illustration)

SumIllustrationDynrBootParaStdXMY(): Summary - Illustration (DynrBootParaStdXMY)

SumIllustrationDynrBootParaXMY(): Summary - Illustration (DynrBootParaXMY)

SumIllustrationDynrDeltaStdXMY(): Summary - Illustration (DynrDeltaStdXMY)

SumIllustrationDynrDeltaXMY(): Summary - Illustration (DynrDeltaXMY)

SumIllustrationDynrMCStdXMY(): Summary - Illustration (DynrMCStdXMY)

SumIllustrationDynrMCXMY(): Summary - Illustration (DynrMCXMY)

SumIllustrationFitDynr(): Summary - Illustration (FitDynr)

illustration_dist: Illustration Sampling Distribution

illustration_dist_dt: Illustration Sampling Distribution Discrete Time - Time Interval of 1

illustration_dist_dt_mc: Illustration Sampling Distribution Discrete Time - Time Interval of 1 (Monte Carlo Method)

illustration_dist_mc: Illustration Sampling Distribution (Monte Carlo Method)

illustration_dist_med: Illustration Sampling Distribution Total, Direct, and Indirect Effects - Time Interval of 1

illustration_dist_med_mc: Illustration Sampling Distribution Total, Direct, and Indirect Effects - Time Interval of 1 (Monte Carlo Method)

illustration_dist_med_std: Illustration Sampling Distribution Standardized Total, Direct, and Indirect Effects - Time Interval of 1

illustration_dist_med_std_mc: Illustration Sampling Distribution Standardized Total, Direct, and Indirect Effects - Time Interval of 1 (Monte Carlo Method)

illustration_results: Illustration Small Scale Simulation Results

Simulation Functions

Sim(): Simulation Replication

SimDynrBootPara(): Simulation Replication - BootPara

SimDynrBootParaStdXMY(): Simulation Replication - BootParaStdXMY

SimDynrBootParaStdYMX(): Simulation Replication - BootParaStdYMX

SimDynrBootParaXMY(): Simulation Replication - BootParaXMY

SimDynrBootParaYMX(): Simulation Replication - BootParaYMX

SimDynrDeltaStdXMY(): Simulation Replication - DynrDeltaStdXMY

SimDynrDeltaStdYMX(): Simulation Replication - DynrDeltaStdYMX

SimDynrDeltaXMY(): Simulation Replication - DynrDeltaXMY

SimDynrDeltaYMX(): Simulation Replication - DynrDeltaYMX

SimDynrMCStdXMY(): Simulation Replication - DynrMCStdXMY

SimDynrMCStdYMX(): Simulation Replication - DynrMCStdYMX

SimDynrMCXMY(): Simulation Replication - DynrMCXMY

SimDynrMCYMX(): Simulation Replication - DynrMCYMX

SimFN(): Simulation File Name

SimFitDynr(): Simulation Replication - FitDynr

SimFitMx(): Simulation Replication - FitMx

SimGenData(): Simulation Replication - GenData

SimPara(): Simulation Replication Parametric Bootstrap (Parallel)

SimProj(): Simulation Project Name

Sum(): Summary

SumDynrDeltaStdXMY(): Summary (DynrDeltaStdXMY)

SumDynrDeltaStdYMX(): Summary (DynrDeltaStdYMX)

SumDynrDeltaXMY(): Summary (DynrDeltaXMY)

SumDynrDeltaYMX(): Summary (DynrDeltaYMX)

SumDynrMCStdXMY(): Summary (DynrMCStdXMY)

SumDynrMCStdYMX(): Summary (DynrMCStdYMX)

SumDynrMCXMY(): Summary (DynrMCXMY)

SumDynrMCYMX(): Summary (DynrMCYMX)

SumFitDynr(): Summary (FitDynr)

Summary Functions

Sum(): Summary

SumDynrDeltaStdXMY(): Summary (DynrDeltaStdXMY)

SumDynrDeltaStdYMX(): Summary (DynrDeltaStdYMX)

SumDynrDeltaXMY(): Summary (DynrDeltaXMY)

SumDynrDeltaYMX(): Summary (DynrDeltaYMX)

SumDynrMCStdXMY(): Summary (DynrMCStdXMY)

SumDynrMCStdYMX(): Summary (DynrMCStdYMX)

SumDynrMCXMY(): Summary (DynrMCXMY)

SumDynrMCYMX(): Summary (DynrMCYMX)

SumFitDynr(): Summary (FitDynr)

SumIllustration(): Summary (Illustration)

SumIllustrationDynrBootParaStdXMY(): Summary - Illustration (DynrBootParaStdXMY)

SumIllustrationDynrBootParaXMY(): Summary - Illustration (DynrBootParaXMY)

SumIllustrationDynrDeltaStdXMY(): Summary - Illustration (DynrDeltaStdXMY)

SumIllustrationDynrDeltaXMY(): Summary - Illustration (DynrDeltaXMY)

SumIllustrationDynrMCStdXMY(): Summary - Illustration (DynrMCStdXMY)

SumIllustrationDynrMCXMY(): Summary - Illustration (DynrMCXMY)

SumIllustrationFitDynr(): Summary - Illustration (FitDynr)

Compression Functions

Compress(): Compress Replication

IllustrationCompress(): Compress Replication (Illustration)

Data

illustration_dist: Illustration Sampling Distribution

illustration_dist_dt: Illustration Sampling Distribution Discrete Time - Time Interval of 1

illustration_dist_dt_mc: Illustration Sampling Distribution Discrete Time - Time Interval of 1 (Monte Carlo Method)

illustration_dist_mc: Illustration Sampling Distribution (Monte Carlo Method)

illustration_dist_med: Illustration Sampling Distribution Total, Direct, and Indirect Effects - Time Interval of 1

illustration_dist_med_mc: Illustration Sampling Distribution Total, Direct, and Indirect Effects - Time Interval of 1 (Monte Carlo Method)

illustration_dist_med_std: Illustration Sampling Distribution Standardized Total, Direct, and Indirect Effects - Time Interval of 1

illustration_dist_med_std_mc: Illustration Sampling Distribution Standardized Total, Direct, and Indirect Effects - Time Interval of 1 (Monte Carlo Method)

illustration_results: Illustration Small Scale Simulation Results

params: Simulation Parameters

results: Simulation Results

Figures

FigPlotEffects(): Plot Total, Direct, and Indirect Effects

FigScatterPlotCoverage(): Plot Coverage Probabilities

FigScatterPlotPower(): Plot Statistical Power

FigScatterPlotSeBias(): Plot Standard Error Bias

FigScatterPlotType1(): Plot Type I Error

IllustrationFigPlotEffects(): Plot Total, Direct, and Indirect Effects (Illustration)

IllustrationFigScatterPlotCoverage(): Illustration Plot Coverage Probabilities

IllustrationFigScatterPlotPower(): Illustration Plot Statistical Power

IllustrationFigScatterPlotSeBias(): Illustration Plot Standard Error Bias

All Functions

BootPara(): Parametric Bootstrap

BootParaStdXMY(): Parametric Bootstrap Confidence Intervals for X-M-Y (Standardized)

BootParaStdXYM(): Parametric Bootstrap Confidence Intervals for X-Y-M (Standardized)

BootParaStdYMX(): Parametric Bootstrap Confidence Intervals for Y-M-X (Standardized)

BootParaXMY(): Parametric Bootstrap Confidence Intervals for X-M-Y

BootParaXYM(): Parametric Bootstrap Confidence Intervals for X-Y-M

BootParaYMX(): Parametric Bootstrap Confidence Intervals for Y-M-X

Compress(): Compress Replication

DeltaStdXMY(): Delta Method Confidence Intervals for X-M-Y (Standardized)

DeltaStdXYM(): Delta Method Confidence Intervals for X-Y-M (Standardized)

DeltaStdYMX(): Delta Method Confidence Intervals for Y-M-X (Standardized)

DeltaXMY(): Delta Method Confidence Intervals for X-M-Y

DeltaXYM(): Delta Method Confidence Intervals for X-Y-M

DeltaYMX(): Delta Method Confidence Intervals for Y-M-X

FigPlotEffects(): Plot Total, Direct, and Indirect Effects

FigScatterPlotCoverage(): Plot Coverage Probabilities

FigScatterPlotPower(): Plot Statistical Power

FigScatterPlotSeBias(): Plot Standard Error Bias

FigScatterPlotType1(): Plot Type I Error

FitDynr(): Fit the Model using the dynr Package

FitMx(): Fit the Model using the OpenMx Package

GenData(): Simulate Data

IllustrationBootPara(): Parametric Bootstrap (Illustration)

IllustrationCompress(): Compress Replication (Illustration)

IllustrationFigPlotEffects(): Plot Total, Direct, and Indirect Effects (Illustration)

IllustrationFigScatterPlotCoverage(): Illustration Plot Coverage Probabilities

IllustrationFigScatterPlotPower(): Illustration Plot Statistical Power

IllustrationFigScatterPlotSeBias(): Illustration Plot Standard Error Bias

IllustrationFitDynr(): Fit the Model using the dynr Package (Illustration)

IllustrationFitMx(): Fit the Model using the OpenMx Package (Illustration)

IllustrationGenData(): Simulate Data (Illustration)

IllustrationMCPhiSigma(): Generate a Sampling Distribution of Drift Matrices and Process Noise Covariance Matrices (Illustration)

IllustrationPrepData(): Prepare Data Before Model Fitting (Illustration)

MCStdXMY(): Monte Carlo Method Confidence Intervals for X-M-Y (Standardized)

MCStdXYM(): Monte Carlo Method Confidence Intervals for X-Y-M (Standardized)

MCStdYMX(): Monte Carlo Method Confidence Intervals for Y-M-X (Standardized)

MCXMY(): Monte Carlo Method Confidence Intervals for X-M-Y

MCXYM(): Monte Carlo Method Confidence Intervals for X-Y-M

MCYMX(): Monte Carlo Method Confidence Intervals for Y-M-X

PhiHat(): Estimated Drift Matrix

RandomMeasurement(): Simulate Random Measurement

Sim(): Simulation Replication

SimDynrBootPara(): Simulation Replication - BootPara

SimDynrBootParaStdXMY(): Simulation Replication - BootParaStdXMY

SimDynrBootParaStdYMX(): Simulation Replication - BootParaStdYMX

SimDynrBootParaXMY(): Simulation Replication - BootParaXMY

SimDynrBootParaYMX(): Simulation Replication - BootParaYMX

SimDynrDeltaStdXMY(): Simulation Replication - DynrDeltaStdXMY

SimDynrDeltaStdYMX(): Simulation Replication - DynrDeltaStdYMX

SimDynrDeltaXMY(): Simulation Replication - DynrDeltaXMY

SimDynrDeltaYMX(): Simulation Replication - DynrDeltaYMX

SimDynrMCStdXMY(): Simulation Replication - DynrMCStdXMY

SimDynrMCStdYMX(): Simulation Replication - DynrMCStdYMX

SimDynrMCXMY(): Simulation Replication - DynrMCXMY

SimDynrMCYMX(): Simulation Replication - DynrMCYMX

SimFN(): Simulation File Name

SimFitDynr(): Simulation Replication - FitDynr

SimFitMx(): Simulation Replication - FitMx

SimGenData(): Simulation Replication - GenData

SimIllustration(): Simulation Replication (Illustration)

SimIllustrationDynrBootPara(): Simulation Replication - BootPara

SimIllustrationDynrBootParaStdXMY(): Simulation Replication - BootParaStdXMY

SimIllustrationDynrBootParaXMY(): Simulation Replication - BootParaXMY

SimIllustrationDynrDeltaStdXMY(): Simulation Replication - Illustration (DynrDeltaStdXMY)

SimIllustrationDynrDeltaXMY(): Simulation Replication - Illustration (DynrDeltaXMY)

SimIllustrationDynrMCPhiSigma(): Simulation Replication - Illustration (MCPhiSigma)

SimIllustrationDynrMCStdXMY(): Simulation Replication - Illustration (DynrMCStdXMY)

SimIllustrationDynrMCXMY(): Simulation Replication - Illustration (DynrMCXMY)

SimIllustrationFitDynr(): Simulation Replication - IllustrationFitDynr

SimIllustrationFitMx(): Simulation Replication - IllustrationFitMx

SimIllustrationGenData(): Simulation Replication - IllustrationGenData

SimIllustrationPara(): Simulation Replication Parametric Bootstrap (Parallel)

SimPara(): Simulation Replication Parametric Bootstrap (Parallel)

SimProj(): Simulation Project Name

Sum(): Summary

SumDynrDeltaStdXMY(): Summary (DynrDeltaStdXMY)

SumDynrDeltaStdYMX(): Summary (DynrDeltaStdYMX)

SumDynrDeltaXMY(): Summary (DynrDeltaXMY)

SumDynrDeltaYMX(): Summary (DynrDeltaYMX)

SumDynrMCStdXMY(): Summary (DynrMCStdXMY)

SumDynrMCStdYMX(): Summary (DynrMCStdYMX)

SumDynrMCXMY(): Summary (DynrMCXMY)

SumDynrMCYMX(): Summary (DynrMCYMX)

SumFitDynr(): Summary (FitDynr)

SumIllustration(): Summary (Illustration)

SumIllustrationDynrBootParaStdXMY(): Summary - Illustration (DynrBootParaStdXMY)

SumIllustrationDynrBootParaXMY(): Summary - Illustration (DynrBootParaXMY)

SumIllustrationDynrDeltaStdXMY(): Summary - Illustration (DynrDeltaStdXMY)

SumIllustrationDynrDeltaXMY(): Summary - Illustration (DynrDeltaXMY)

SumIllustrationDynrMCStdXMY(): Summary - Illustration (DynrMCStdXMY)

SumIllustrationDynrMCXMY(): Summary - Illustration (DynrMCXMY)

SumIllustrationFitDynr(): Summary - Illustration (FitDynr)

ThetaHat(): Estimated Drift Matrix and Process Noise