R version 4.4.2 (2024-10-31)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 24.04.1 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so; LAPACK version 3.12.0
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
time zone: Etc/UTC
tzcode source: system (glibc)
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] htmlwidgets_1.6.4 compiler_4.4.2 fastmap_1.2.0 cli_3.6.3.9002
[5] tools_4.4.2 htmltools_0.5.8.1 yaml_2.3.10 rmarkdown_2.29
[9] knitr_1.49 jsonlite_1.8.9 xfun_0.50 digest_0.6.37
[13] rlang_1.1.5 evaluate_1.0.3 Appendix A — Website Build Session
Session
/srv/build/CONTAINER_RELEASE: 18db9a36021788d82102ed6e1f5ea075fde2f64b
/srv/build/CONTAINER_RELEASE_MSG: This release is based on commit 18db9a36021788d82102ed6e1f5ea075fde2f64b.
/srv/build/DOCKER_HUB_CONTAINER: docs
/srv/build/DOCKER_HUB_USERNAME: ijapesigan
/srv/build/GIT_HUB_REPO: docker-docs
/srv/build/GIT_HUB_USERNAME: ijapesiganPackages
installed.packages()[, c("Package", "Version")] Package Version
abind "abind" "1.4-8"
Amelia "Amelia" "1.8.3"
arm "arm" "1.14-4"
arrow "arrow" "18.1.0.1"
ash "ash" "1.0-15"
AsioHeaders "AsioHeaders" "1.22.1-2"
askpass "askpass" "1.2.1"
assertthat "assertthat" "0.2.1"
backports "backports" "1.5.0"
base64enc "base64enc" "0.1-3"
betaDelta "betaDelta" "1.0.6"
betaMC "betaMC" "1.3.3"
betaNB "betaNB" "1.0.5.9000"
betaSandwich "betaSandwich" "1.0.8"
BH "BH" "1.87.0-1"
bibtex "bibtex" "0.5.1"
BiocManager "BiocManager" "1.30.25"
bit "bit" "4.5.0.1"
bit64 "bit64" "4.6.0-1"
bitops "bitops" "1.0-9"
blob "blob" "1.2.4"
bootStateSpace "bootStateSpace" "1.0.1"
brew "brew" "1.0-10"
brio "brio" "1.1.5"
broom "broom" "1.0.7"
bslib "bslib" "0.8.0"
cachem "cachem" "1.1.0"
callr "callr" "3.7.6"
car "car" "3.1-3"
caracas "caracas" "2.1.1"
carData "carData" "3.0-5"
cellranger "cellranger" "1.1.0"
cffr "cffr" "1.2.0"
checkmate "checkmate" "2.3.2"
cli "cli" "3.6.3.9002"
clipr "clipr" "0.8.0"
clock "clock" "0.7.2"
clusterGeneration "clusterGeneration" "1.3.8"
coda "coda" "0.19-4.1"
cOde "cOde" "1.1.1"
collections "collections" "0.3.7"
colorspace "colorspace" "2.1-1"
commonmark "commonmark" "1.9.2"
conflicted "conflicted" "1.2.0"
corpcor "corpcor" "1.6.10"
covr "covr" "3.6.4"
cowplot "cowplot" "1.1.3"
cpp11 "cpp11" "0.5.1"
crayon "crayon" "1.5.3"
credentials "credentials" "2.0.2"
crosstalk "crosstalk" "1.2.1"
cTMed "cTMed" "1.0.5.9000"
ctsem "ctsem" "3.10.2"
curl "curl" "6.2.0"
cyclocomp "cyclocomp" "1.1.1"
data.table "data.table" "1.16.4"
DBI "DBI" "1.2.3"
dbplyr "dbplyr" "2.5.0"
Deriv "Deriv" "4.1.6"
desc "desc" "1.4.3"
deSolve "deSolve" "1.40"
devtools "devtools" "2.4.5.9000"
diagram "diagram" "1.6.5"
dials "dials" "1.3.0"
DiceDesign "DiceDesign" "1.10"
diffobj "diffobj" "0.3.5"
digest "digest" "0.6.37"
distributional "distributional" "0.5.0"
distro "distro" "0.1.0"
doBy "doBy" "4.6.24"
docopt "docopt" "0.7.1"
doFuture "doFuture" "1.0.1"
downlit "downlit" "0.4.4"
dplyr "dplyr" "1.1.4"
DT "DT" "0.33"
dtplyr "dtplyr" "1.3.1"
duckdb "duckdb" "1.1.3-2"
dynr "dynr" "0.1.16-109"
dynUtils "dynUtils" "0.9.1"
ellipse "ellipse" "0.5.0"
ellipsis "ellipsis" "0.3.2"
evaluate "evaluate" "1.0.3"
expm "expm" "1.0-0"
fansi "fansi" "1.0.6"
farver "farver" "2.1.2"
fastDummies "fastDummies" "1.7.5"
fastmap "fastmap" "1.2.0"
fclust "fclust" "2.1.1.1"
fda "fda" "6.2.0"
fdrtool "fdrtool" "1.2.18"
fds "fds" "1.8"
fitCTVARMx "fitCTVARMx" "0.0.0.9000"
fitDTVARMx "fitDTVARMx" "0.0.0.9000"
FNN "FNN" "1.1.4.1"
fontawesome "fontawesome" "0.5.3"
forcats "forcats" "1.0.0"
foreach "foreach" "1.5.2"
Formula "Formula" "1.2-5"
fs "fs" "1.6.5"
fst "fst" "0.9.8"
fstcore "fstcore" "0.9.18"
furrr "furrr" "0.3.1"
future "future" "1.34.0"
future.apply "future.apply" "1.11.3"
gargle "gargle" "1.5.2"
generics "generics" "0.1.3"
gert "gert" "2.1.4"
ggplot2 "ggplot2" "3.5.1"
ggrepel "ggrepel" "0.9.6"
gh "gh" "1.4.1"
gitcreds "gitcreds" "0.1.2"
glasso "glasso" "1.11"
glmnet "glmnet" "4.1-8"
globals "globals" "0.16.3"
glue "glue" "1.8.0"
googledrive "googledrive" "2.1.1"
googlesheets4 "googlesheets4" "1.1.1"
gower "gower" "1.0.2"
GPArotation "GPArotation" "2024.3-1"
GPfit "GPfit" "1.0-8"
graphicalVAR "graphicalVAR" "0.3.4"
gridExtra "gridExtra" "2.3"
gsubfn "gsubfn" "0.7"
gtable "gtable" "0.3.6"
gtools "gtools" "3.9.5"
hardhat "hardhat" "1.4.0"
haven "haven" "2.5.4"
hdrcde "hdrcde" "3.4"
here "here" "1.0.1"
highr "highr" "0.11"
Hmisc "Hmisc" "5.2-2"
hms "hms" "1.1.3"
htmlTable "htmlTable" "2.4.3"
htmltools "htmltools" "0.5.8.1"
htmlwidgets "htmlwidgets" "1.6.4"
httpgd "httpgd" "2.0.2"
httpuv "httpuv" "1.6.15"
httr "httr" "1.4.7"
httr2 "httr2" "1.1.0"
ids "ids" "1.0.1"
ifaTools "ifaTools" "0.23"
igraph "igraph" "2.1.4"
infer "infer" "1.0.7"
ini "ini" "0.3.1"
inline "inline" "0.3.21"
ipred "ipred" "0.9-15"
isoband "isoband" "0.2.7"
iterators "iterators" "1.0.14"
jomo "jomo" "2.7-6"
jpeg "jpeg" "0.1-10"
jquerylib "jquerylib" "0.1.4"
jsonlite "jsonlite" "1.8.9"
jsonvalidate "jsonvalidate" "1.3.2"
kernlab "kernlab" "0.9-33"
knitr "knitr" "1.49"
ks "ks" "1.14.3"
labeling "labeling" "0.4.3"
Lahman "Lahman" "12.0-0"
languageserver "languageserver" "0.3.16"
later "later" "1.4.1"
latex2exp "latex2exp" "0.9.6"
lava "lava" "1.8.1"
lavaan "lavaan" "0.6-19"
lazyeval "lazyeval" "0.2.2"
lhs "lhs" "1.2.0"
lifecycle "lifecycle" "1.0.4"
lintr "lintr" "3.1.2"
listenv "listenv" "0.9.1"
littler "littler" "0.3.20"
lme4 "lme4" "1.1-36"
locfit "locfit" "1.5-9.10"
longMI "longMI" "1.0.0"
loo "loo" "2.8.0"
lubridate "lubridate" "1.9.4"
magick "magick" "2.8.5"
magrittr "magrittr" "2.0.3"
markdown "markdown" "1.13"
MatrixModels "MatrixModels" "0.5-3"
matrixStats "matrixStats" "1.5.0"
mclust "mclust" "6.1.1"
memoise "memoise" "2.0.1"
metaSEM "metaSEM" "1.5.0"
metaVAR "metaVAR" "0.0.0.9000"
mice "mice" "3.17.0"
microbenchmark "microbenchmark" "1.5.0"
mime "mime" "0.12"
miniUI "miniUI" "0.1.1.1"
minqa "minqa" "1.2.8"
mitml "mitml" "0.4-5"
mize "mize" "0.2.4"
mlVAR "mlVAR" "0.5.2"
mnormt "mnormt" "2.1.1"
modeldata "modeldata" "1.4.0"
modelenv "modelenv" "0.2.0"
modelr "modelr" "0.1.11"
MplusAutomation "MplusAutomation" "1.1.1"
multicool "multicool" "1.0.1"
munsell "munsell" "0.5.1"
mvtnorm "mvtnorm" "1.3-3"
nloptr "nloptr" "2.1.1"
numDeriv "numDeriv" "2016.8-1.1"
nycflights13 "nycflights13" "1.0.2"
OpenMx "OpenMx" "2.21.13"
openssl "openssl" "2.3.1"
ordinal "ordinal" "2023.12-4.1"
pan "pan" "1.9"
pander "pander" "0.6.5"
parallelly "parallelly" "1.41.0"
parsnip "parsnip" "1.2.1"
patchwork "patchwork" "1.3.0"
pbapply "pbapply" "1.7-2"
pbivnorm "pbivnorm" "0.6.0"
pbkrtest "pbkrtest" "0.5.3"
pcaPP "pcaPP" "2.0-5"
pdftools "pdftools" "3.4.1"
pillar "pillar" "1.10.1"
pkgbuild "pkgbuild" "1.4.6"
pkgconfig "pkgconfig" "2.0.3"
pkgdown "pkgdown" "2.1.1"
pkgload "pkgload" "1.4.0"
plogr "plogr" "0.2.0"
plyr "plyr" "1.8.9"
png "png" "0.1-8"
posterior "posterior" "1.6.0"
pracma "pracma" "2.4.4"
praise "praise" "1.0.0"
prettyunits "prettyunits" "1.2.0"
printr "printr" "0.3"
processx "processx" "3.8.5"
prodlim "prodlim" "2024.06.25"
profvis "profvis" "0.4.0"
progress "progress" "1.2.3"
progressr "progressr" "0.15.1"
promises "promises" "1.3.2"
proto "proto" "1.0.0"
ps "ps" "1.8.1"
psych "psych" "2.4.12"
purrr "purrr" "1.0.2"
qgraph "qgraph" "1.9.8"
qpdf "qpdf" "1.3.4"
quadprog "quadprog" "1.5-8"
quantreg "quantreg" "6.00"
quarto "quarto" "1.4.4"
QuickJSR "QuickJSR" "1.5.1"
R.cache "R.cache" "0.16.0"
R.methodsS3 "R.methodsS3" "1.8.2"
R.oo "R.oo" "1.27.0"
R.utils "R.utils" "2.12.3"
R6 "R6" "2.5.1"
ragg "ragg" "1.3.3"
rainbow "rainbow" "3.8"
rappdirs "rappdirs" "0.3.3"
rbibutils "rbibutils" "2.3"
rcmdcheck "rcmdcheck" "1.4.0"
RColorBrewer "RColorBrewer" "1.1-3"
Rcpp "Rcpp" "1.0.14"
RcppArmadillo "RcppArmadillo" "14.2.2-1"
RcppEigen "RcppEigen" "0.3.4.0.2"
RcppGSL "RcppGSL" "0.3.13"
RcppParallel "RcppParallel" "5.1.10"
RcppTOML "RcppTOML" "0.2.2"
RCurl "RCurl" "1.98-1.16"
Rdpack "Rdpack" "2.6.2"
readr "readr" "2.1.5"
readxl "readxl" "1.4.3"
recipes "recipes" "1.1.0"
RefManageR "RefManageR" "1.4.0"
reformulas "reformulas" "0.4.0"
rematch "rematch" "2.0.0"
rematch2 "rematch2" "2.1.2"
remotes "remotes" "2.5.0"
reprex "reprex" "2.1.1"
reshape2 "reshape2" "1.4.4"
reticulate "reticulate" "1.40.0"
rex "rex" "1.2.1"
rhub "rhub" "2.0.0"
rjags "rjags" "4-16"
rlang "rlang" "1.1.5"
RMariaDB "RMariaDB" "1.3.3"
rmarkdown "rmarkdown" "2.29"
roxygen2 "roxygen2" "7.3.2"
rpf "rpf" "1.0.14"
RPostgres "RPostgres" "1.4.7"
rProject "rProject" "0.0.18"
rprojroot "rprojroot" "2.0.4"
rsample "rsample" "1.2.1"
RSQLite "RSQLite" "2.3.9"
rstan "rstan" "2.32.6"
rstantools "rstantools" "2.4.0"
rstudioapi "rstudioapi" "0.17.1"
rversions "rversions" "2.1.2"
rvest "rvest" "1.0.4"
Ryacas "Ryacas" "1.1.5"
sass "sass" "0.4.9"
scales "scales" "1.3.0"
selectr "selectr" "0.4-2"
semlbci "semlbci" "0.11.3"
semmcci "semmcci" "1.1.5"
sessioninfo "sessioninfo" "1.2.2"
sfd "sfd" "0.1.0"
shape "shape" "1.4.6.1"
shiny "shiny" "1.10.0"
simStateSpace "simStateSpace" "1.2.8.9000"
slider "slider" "0.3.2"
snow "snow" "0.4-4"
snowfall "snowfall" "1.84-6.3"
sourcetools "sourcetools" "0.1.7-1"
SparseM "SparseM" "1.84-2"
SQUAREM "SQUAREM" "2021.1"
StanHeaders "StanHeaders" "2.32.10"
statmod "statmod" "1.5.0"
stringi "stringi" "1.8.4"
stringr "stringr" "1.5.1"
styler "styler" "1.10.3"
symSEM "symSEM" "0.4"
sys "sys" "3.4.3"
systemfonts "systemfonts" "1.2.1"
tensorA "tensorA" "0.36.2.1"
testthat "testthat" "3.2.3"
texreg "texreg" "1.39.4"
textshaping "textshaping" "1.0.0"
tibble "tibble" "3.2.1"
tidymodels "tidymodels" "1.2.0"
tidyr "tidyr" "1.3.1"
tidyselect "tidyselect" "1.2.1"
tidyverse "tidyverse" "2.0.0"
timechange "timechange" "0.3.0"
timeDate "timeDate" "4041.110"
tinytex "tinytex" "0.54.2"
tune "tune" "1.2.1"
tzdb "tzdb" "0.4.0"
ucminf "ucminf" "1.2.2"
unigd "unigd" "0.1.2"
urlchecker "urlchecker" "1.0.1"
usethis "usethis" "3.1.0"
utf8 "utf8" "1.2.4"
uuid "uuid" "1.2-1"
V8 "V8" "6.0.0"
vctrs "vctrs" "0.6.5"
viridis "viridis" "0.6.5"
viridisLite "viridisLite" "0.4.2"
vroom "vroom" "1.6.5"
waldo "waldo" "0.6.1"
warp "warp" "0.2.1"
whisker "whisker" "0.4.1"
whoami "whoami" "1.3.0"
withr "withr" "3.0.2"
workflows "workflows" "1.1.4"
workflowsets "workflowsets" "1.1.0"
xfun "xfun" "0.50"
xml2 "xml2" "1.3.6"
xmlparsedata "xmlparsedata" "1.0.5"
xopen "xopen" "1.0.1"
xtable "xtable" "1.8-4"
yaml "yaml" "2.3.10"
yardstick "yardstick" "1.3.2"
zip "zip" "2.3.1"
base "base" "4.4.2"
boot "boot" "1.3-31"
class "class" "7.3-22"
cluster "cluster" "2.1.6"
codetools "codetools" "0.2-20"
compiler "compiler" "4.4.2"
datasets "datasets" "4.4.2"
foreign "foreign" "0.8-87"
graphics "graphics" "4.4.2"
grDevices "grDevices" "4.4.2"
grid "grid" "4.4.2"
KernSmooth "KernSmooth" "2.23-24"
lattice "lattice" "0.22-6"
MASS "MASS" "7.3-61"
Matrix "Matrix" "1.7-1"
methods "methods" "4.4.2"
mgcv "mgcv" "1.9-1"
nlme "nlme" "3.1-166"
nnet "nnet" "7.3-19"
parallel "parallel" "4.4.2"
rpart "rpart" "4.1.23"
spatial "spatial" "7.3-17"
splines "splines" "4.4.2"
stats "stats" "4.4.2"
stats4 "stats4" "4.4.2"
survival "survival" "3.7-0"
tcltk "tcltk" "4.4.2"
tools "tools" "4.4.2"
utils "utils" "4.4.2" CPU
Architecture: x86_64
CPU op-mode(s): 32-bit, 64-bit
Address sizes: 48 bits physical, 48 bits virtual
Byte Order: Little Endian
CPU(s): 4
On-line CPU(s) list: 0-3
Vendor ID: AuthenticAMD
Model name: AMD EPYC 7763 64-Core Processor
CPU family: 25
Model: 1
Thread(s) per core: 2
Core(s) per socket: 2
Socket(s): 1
Stepping: 1
BogoMIPS: 4890.84
Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good nopl tsc_reliable nonstop_tsc cpuid extd_apicid aperfmperf pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm cmp_legacy svm cr8_legacy abm sse4a misalignsse 3dnowprefetch osvw topoext vmmcall fsgsbase bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap clflushopt clwb sha_ni xsaveopt xsavec xgetbv1 xsaves user_shstk clzero xsaveerptr rdpru arat npt nrip_save tsc_scale vmcb_clean flushbyasid decodeassists pausefilter pfthreshold v_vmsave_vmload umip vaes vpclmulqdq rdpid fsrm
Virtualization: AMD-V
Hypervisor vendor: Microsoft
Virtualization type: full
L1d cache: 64 KiB (2 instances)
L1i cache: 64 KiB (2 instances)
L2 cache: 1 MiB (2 instances)
L3 cache: 32 MiB (1 instance)
NUMA node(s): 1
NUMA node0 CPU(s): 0-3
Vulnerability Gather data sampling: Not affected
Vulnerability Itlb multihit: Not affected
Vulnerability L1tf: Not affected
Vulnerability Mds: Not affected
Vulnerability Meltdown: Not affected
Vulnerability Mmio stale data: Not affected
Vulnerability Reg file data sampling: Not affected
Vulnerability Retbleed: Not affected
Vulnerability Spec rstack overflow: Vulnerable: Safe RET, no microcode
Vulnerability Spec store bypass: Vulnerable
Vulnerability Spectre v1: Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2: Mitigation; Retpolines; STIBP disabled; RSB filling; PBRSB-eIBRS Not affected; BHI Not affected
Vulnerability Srbds: Not affected
Vulnerability Tsx async abort: Not affectedMemory
total used free shared buff/cache available
Mem: 15Gi 1.6Gi 1.1Gi 72Mi 13Gi 13Gi
Swap: 4.0Gi 0B 4.0Gi
Total: 19Gi 1.6Gi 5.1Gi