Session
sessionInfo()
#> R version 4.5.3 (2026-03-11)
#> Platform: x86_64-pc-linux-gnu
#> Running under: Ubuntu 24.04.4 LTS
#>
#> Matrix products: default
#> BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
#> LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so; LAPACK version 3.12.0
#>
#> locale:
#> [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
#> [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
#> [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
#> [7] LC_PAPER=en_US.UTF-8 LC_NAME=C
#> [9] LC_ADDRESS=C LC_TELEPHONE=C
#> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
#>
#> time zone: Etc/UTC
#> tzcode source: system (glibc)
#>
#> attached base packages:
#> [1] stats graphics grDevices utils datasets methods base
#>
#> other attached packages:
#> [1] manMetaVAR_0.5.8 metaDyn_1.0.1 fitVARMxID_1.0.2.9000
#> [4] OpenMx_2.22.11 microbenchmark_1.5.0
#>
#> loaded via a namespace (and not attached):
#> [1] Matrix_1.7-4 gtable_0.3.6 dplyr_1.2.0
#> [4] compiler_4.5.3 tidyselect_1.2.1 Rcpp_1.1.1
#> [7] parallel_4.5.3 systemfonts_1.3.2 scales_1.4.0
#> [10] textshaping_1.0.5 lattice_0.22-9 ggplot2_4.0.2
#> [13] R6_2.6.1 labeling_0.4.3 generics_0.1.4
#> [16] knitr_1.51 MASS_7.3-65 tibble_3.3.1
#> [19] rprojroot_2.1.1 pillar_1.11.1 RColorBrewer_1.1-3
#> [22] rlang_1.2.0 xfun_0.57 S7_0.2.1
#> [25] RcppParallel_5.1.11-2 otel_0.2.0 cli_3.6.5.9000
#> [28] withr_3.0.2 magrittr_2.0.5 digest_0.6.39
#> [31] grid_4.5.3 rProject_0.0.25 lifecycle_1.0.5
#> [34] vctrs_0.7.2 simStateSpace_1.2.16 evaluate_1.0.5
#> [37] glue_1.8.0 farver_2.1.2 ragg_1.5.2
#> [40] tools_4.5.3 pkgconfig_2.0.3CPU
cat(system("lscpu", intern = TRUE), sep = "\n")
#> Architecture: x86_64
#> CPU op-mode(s): 32-bit, 64-bit
#> Address sizes: 48 bits physical, 48 bits virtual
#> Byte Order: Little Endian
#> CPU(s): 32
#> On-line CPU(s) list: 0-31
#> Vendor ID: AuthenticAMD
#> Model name: AMD Ryzen 9 9955HX 16-Core Processor
#> CPU family: 26
#> Model: 68
#> Thread(s) per core: 2
#> Core(s) per socket: 16
#> Socket(s): 1
#> Stepping: 0
#> Frequency boost: enabled
#> CPU(s) scaling MHz: 46%
#> CPU max MHz: 5060.9761
#> CPU min MHz: 1219.5129
#> BogoMIPS: 4990.43
#> Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good amd_lbr_v2 nopl xtopology nonstop_tsc cpuid extd_apicid aperfmperf rapl pni pclmulqdq monitor ssse3 fma cx16 sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand lahf_lm cmp_legacy svm extapic cr8_legacy abm sse4a misalignsse 3dnowprefetch osvw ibs skinit wdt tce topoext perfctr_core perfctr_nb bpext perfctr_llc mwaitx cpb cat_l3 cdp_l3 hw_pstate ssbd mba perfmon_v2 ibrs ibpb stibp ibrs_enhanced vmmcall fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid cqm rdt_a avx512f avx512dq rdseed adx smap avx512ifma clflushopt clwb avx512cd sha_ni avx512bw avx512vl xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local user_shstk avx_vnni avx512_bf16 clzero irperf xsaveerptr rdpru wbnoinvd cppc arat npt lbrv svm_lock nrip_save tsc_scale vmcb_clean flushbyasid decodeassists pausefilter pfthreshold v_vmsave_vmload vgif x2avic v_spec_ctrl vnmi avx512vbmi umip pku ospke avx512_vbmi2 gfni vaes vpclmulqdq avx512_vnni avx512_bitalg avx512_vpopcntdq rdpid bus_lock_detect movdiri movdir64b overflow_recov succor smca fsrm avx512_vp2intersect flush_l1d amd_lbr_pmc_freeze
#> Virtualization: AMD-V
#> L1d cache: 768 KiB (16 instances)
#> L1i cache: 512 KiB (16 instances)
#> L2 cache: 16 MiB (16 instances)
#> L3 cache: 64 MiB (2 instances)
#> NUMA node(s): 1
#> NUMA node0 CPU(s): 0-31
#> Vulnerability Gather data sampling: Not affected
#> Vulnerability Indirect target selection: Not affected
#> Vulnerability Itlb multihit: Not affected
#> Vulnerability L1tf: Not affected
#> Vulnerability Mds: Not affected
#> Vulnerability Meltdown: Not affected
#> Vulnerability Mmio stale data: Not affected
#> Vulnerability Reg file data sampling: Not affected
#> Vulnerability Retbleed: Not affected
#> Vulnerability Spec rstack overflow: Mitigation; IBPB on VMEXIT only
#> Vulnerability Spec store bypass: Mitigation; Speculative Store Bypass disabled via prctl
#> Vulnerability Spectre v1: Mitigation; usercopy/swapgs barriers and __user pointer sanitization
#> Vulnerability Spectre v2: Mitigation; Enhanced / Automatic IBRS; IBPB conditional; STIBP always-on; PBRSB-eIBRS Not affected; BHI Not affected
#> Vulnerability Srbds: Not affected
#> Vulnerability Tsa: Not affected
#> Vulnerability Tsx async abort: Not affected
#> Vulnerability Vmscape: Mitigation; IBPB on VMEXIT