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Containers

Ivan Jacob Agaloos Pesigan

Source: vignettes/containers.Rmd
containers.Rmd

Docker and Apptainer are required to build the containers described below.

Apptainer/Singularity Image File

The simulation was performed using the Apptainer/Singularity manculta.sif image file. The image is a linux container with the manCULTA package and all the dependencies pre-installed.

To build the Apptainer/Singularity image file (manculta.sif), run the following.

apptainer pull manculta.sif docker://ijapesigan/manculta:latest

RStudio IDE Docker Container

To facilitate exploration of the package, we created a Docker container based on the Rocker Project. The manCULTA package and all the dependencies are pre-installed and can be accessed in the browser using the Rstudio IDE.

Run

To launch Rstudio Server, run the following.

docker run --rm -ti -e PASSWORD=yourpassword -p 127.0.0.1:8787:8787 ijapesigan/manculta

Open http://localhost:8787 on your web browser to launch Rstudio Server.

  • username: rstudio
  • password: yourpassword

NOTE: Mplus is closed-source and proprietary software, so it cannot be included in publicly available containers. Consequently, some functions that require Mplus will not work in these containers.